publications
Molecular characterization of a flatworm Girardia isolate from Guanajuato, Mexico.
Duncan, E.M., Nowotarski, S.H., Guerrero-Hernández, C., Ross, E.J., D’Orazio, J.A., Clubes de Ciencia México Workshop for Developmental Biology, McKinney, S., McHargue, M.C., Guo, L., McClain, M., Sánchez Alvarado, A. (2022). Biorxiv. https://doi.org/10.1101/2020.07.01.183442
RNAi screen of RING/U-box domain ubiquitin ligases identifies critical regulators of tissue regeneration in planarians.
Allen, J.M., Balagtas, M., Barajas, E., Cano Macip, C., Alvarez Zepeda, S., Iberkleid, I., Duncan, E.M., Zayas, R.M. (2022) Frontiers in Cell and Developmental Biology, 9, 803419
Set1 Targets Genes with Essential Identity and Tumor Suppressing Functions in Planarian Stem Cells.
Verma, P., Waterbury, C.K.M., Duncan, E.M. (2021) Genes, 12, 1182.
Laboratory Maintenance and Propagation of Freshwater Planarians.
Dean, M.R.P., Duncan E.M. (2020). Current Protocols in Microbiology. 59, e120.
Regulation of Genomic Output and (Pluri)potency in Regeneration.
Duncan, E.M. and Sánchez Alvarado, A. (2019). Annual Review of Genetics, 53, 327-346. (Review)
Planarians recruit piRNAs for mRNA turnover in adult stem cells.
Kim, I. V., Duncan, E.M., Ross, E. J., Gorbovytska, V., Nowotarski, S., Elliott , S. A., Sánchez Alvarado, A., Kuhn , C.D. (2019). Genes & Development, 33, 1575-1590.
Set1 and MLL1/2 Target Distinct Sets of Functionally Different Genomic Loci In Vivo.
Duncan, E.M., Chitsazan A.D., Seidel C.W, and Sánchez Alvarado, A. (2015). Cell Reports, 13, 2741-55.
Errors in erasure: links between histone lysine methylation removal and disease.
Duncan, E.M. and Allis, C.D. (2011). Progress in Drug Research. 67, 69-90. (Review)
Cathepsin L Proteolytically Processes Histone H3 During Mouse Embryonic Stem Cell Differentiation.
Duncan, E.M., Muratore-Schroeder, T.L., Cook, R.G., Garcia, B.A., Shabanowitz, J., Hunt, D.F., Allis, C.D. (2008). Cell, 135, 284-294.
Structural basis for lower lysine methylation state-specific readout by MBT repeats of L3MBTL1 and an engineered PHD finger.
Li, H., Fischle, W., Wang, W., Duncan, E.M., Liang, L., Murakami-Ishibe, S., Allis, C.D., Patel, D.J. (2007). Molecular Cell, 28, 677-691.
Two loci on chromosome 9 control bile acid composition: evidence that a strong candidate gene, Cyp8b1, is not the culprit.
Sehayek, E., Hagey, L.R., Fung, Y.Y., Duncan, E.M., Yu, H.J., Eggertsen, G., Björkhem, I., Hofmann, A.F., Breslow, J.L. (2006). Journal of Lipid Research. 47, 2020-2027.
Molecular basis for site/state-specific readout of histone lysine-methylation marks by the PHD domain of BPTF.
Li, H., Ilin, S., Wang, W., Duncan, E.M., Wysocka, J., Allis, C.D., Patel, D.J. (2006). Nature, 442, 91-95.
Mouse polycomb proteins bind differentially to methylated histone H3 and RNA and are enriched in facultative heterochromatin.
Bernstein, E., Duncan, E.M., Masui, O., Gil, J., Heard, E., Allis, C.D. (2006). Molecular and Cellular Biology, 26, 2560-2569.
Expression patterns and post-translational modifications associated with mammalian histone H3 variants.
Hake, S.B., Garcia, B.A., Duncan, E.M., Kauer, M., Dellaire, G., Shabanowitz, J., Bazett-Jones, D.P., Allis, C.D., Hunt, D.F. (2006). Journal of Biological Chemistry, 281, 559-568.
Phytosterolemia on the island of Kosrae: founder effect for a novel ABCG8 mutation results in high carrier rate and increased plasma plant sterol levels.
Sehayek, E., Yu, H.J., von Bergmann, K., Lutjohann, D., Stoffel, M., Duncan, E.M., Garcia-Naveda, L., Salit, J., Blundell, M.L., Friedman, J.M., Breslow, J.L. (2004). Journal of Lipid Research, 45, 1608-1613.
Novel putative SREBP and LXR target genes identified by microarray analysis in liver of cholesterol-fed mice.
Maxwell, K.N., Soccio, R.E., Duncan, E.M., Sehayek, E., Breslow, J.L. (2003). Journal of Lipid Research, 44, 2109-2119.
Loci controlling plasma non-HDL and HDL cholesterol levels in a C57BL /6J x CASA/Rk intercross.
Sehayek, E., Duncan, E.M., Yu, H.J., Petukhova, L., Breslow, J.L. (2003). Journal of Lipid Research, 44, 1744-1750.
Localization of the PE methylation pathway and SR-BI to the canalicular membrane: evidence for apical PC biosynthesis that may promote biliary excretion of phospholipid and cholesterol.
Sehayek, E., Wang, R., Ono, J.G., Zinchuk, V.S., Duncan, E.M., Shefer, S., Vance, D.E., Ananthanarayanan, M., Chait, B.T., Breslow, J.L. (2003). Journal of Lipid Research, 44, 1605-1613.
Necroinflammatory liver disease in BALB/c background, TGF-beta 1-deficient mice requires CD4+ T cells.
Rudner, L.A., Lin, J.T., Park, I.K., Cates, J.M., Dyer, D.A., Franz, D.M., French, M.A., Duncan, E.M., White, H.D., Gorham, J.D. (2003). Journal of Immunology, 170, 4785-4792.
Loci on chromosomes 14 and 2, distinct from ABCG5/ABCG8, regulate plasma plant sterol levels in a C57BL/6J x CASA/Rk intercross.
Sehayek E., Duncan E.M., Lutjohann D., Von Bergmann K., Ono J.G., Batta A.K., Salen G., Breslow J.L. (2002). Proceedings from the National Academy of Sciences, 99, 16215-16219.
Hyodeoxycholic acid efficiently suppresses atherosclerosis formation and plasma cholesterol levels in mice.
Sehayek E., Ono J.G., Duncan E.M., Batta A.K., Salen G., Shefer S., Neguyen L.B., Yang K., Lipkin M., Breslow J.L. (2001). Journal of Lipid Research, 42, 1250-1256.
Duncan, E.M., Nowotarski, S.H., Guerrero-Hernández, C., Ross, E.J., D’Orazio, J.A., Clubes de Ciencia México Workshop for Developmental Biology, McKinney, S., McHargue, M.C., Guo, L., McClain, M., Sánchez Alvarado, A. (2022). Biorxiv. https://doi.org/10.1101/2020.07.01.183442
RNAi screen of RING/U-box domain ubiquitin ligases identifies critical regulators of tissue regeneration in planarians.
Allen, J.M., Balagtas, M., Barajas, E., Cano Macip, C., Alvarez Zepeda, S., Iberkleid, I., Duncan, E.M., Zayas, R.M. (2022) Frontiers in Cell and Developmental Biology, 9, 803419
Set1 Targets Genes with Essential Identity and Tumor Suppressing Functions in Planarian Stem Cells.
Verma, P., Waterbury, C.K.M., Duncan, E.M. (2021) Genes, 12, 1182.
Laboratory Maintenance and Propagation of Freshwater Planarians.
Dean, M.R.P., Duncan E.M. (2020). Current Protocols in Microbiology. 59, e120.
Regulation of Genomic Output and (Pluri)potency in Regeneration.
Duncan, E.M. and Sánchez Alvarado, A. (2019). Annual Review of Genetics, 53, 327-346. (Review)
Planarians recruit piRNAs for mRNA turnover in adult stem cells.
Kim, I. V., Duncan, E.M., Ross, E. J., Gorbovytska, V., Nowotarski, S., Elliott , S. A., Sánchez Alvarado, A., Kuhn , C.D. (2019). Genes & Development, 33, 1575-1590.
Set1 and MLL1/2 Target Distinct Sets of Functionally Different Genomic Loci In Vivo.
Duncan, E.M., Chitsazan A.D., Seidel C.W, and Sánchez Alvarado, A. (2015). Cell Reports, 13, 2741-55.
Errors in erasure: links between histone lysine methylation removal and disease.
Duncan, E.M. and Allis, C.D. (2011). Progress in Drug Research. 67, 69-90. (Review)
Cathepsin L Proteolytically Processes Histone H3 During Mouse Embryonic Stem Cell Differentiation.
Duncan, E.M., Muratore-Schroeder, T.L., Cook, R.G., Garcia, B.A., Shabanowitz, J., Hunt, D.F., Allis, C.D. (2008). Cell, 135, 284-294.
Structural basis for lower lysine methylation state-specific readout by MBT repeats of L3MBTL1 and an engineered PHD finger.
Li, H., Fischle, W., Wang, W., Duncan, E.M., Liang, L., Murakami-Ishibe, S., Allis, C.D., Patel, D.J. (2007). Molecular Cell, 28, 677-691.
Two loci on chromosome 9 control bile acid composition: evidence that a strong candidate gene, Cyp8b1, is not the culprit.
Sehayek, E., Hagey, L.R., Fung, Y.Y., Duncan, E.M., Yu, H.J., Eggertsen, G., Björkhem, I., Hofmann, A.F., Breslow, J.L. (2006). Journal of Lipid Research. 47, 2020-2027.
Molecular basis for site/state-specific readout of histone lysine-methylation marks by the PHD domain of BPTF.
Li, H., Ilin, S., Wang, W., Duncan, E.M., Wysocka, J., Allis, C.D., Patel, D.J. (2006). Nature, 442, 91-95.
Mouse polycomb proteins bind differentially to methylated histone H3 and RNA and are enriched in facultative heterochromatin.
Bernstein, E., Duncan, E.M., Masui, O., Gil, J., Heard, E., Allis, C.D. (2006). Molecular and Cellular Biology, 26, 2560-2569.
Expression patterns and post-translational modifications associated with mammalian histone H3 variants.
Hake, S.B., Garcia, B.A., Duncan, E.M., Kauer, M., Dellaire, G., Shabanowitz, J., Bazett-Jones, D.P., Allis, C.D., Hunt, D.F. (2006). Journal of Biological Chemistry, 281, 559-568.
Phytosterolemia on the island of Kosrae: founder effect for a novel ABCG8 mutation results in high carrier rate and increased plasma plant sterol levels.
Sehayek, E., Yu, H.J., von Bergmann, K., Lutjohann, D., Stoffel, M., Duncan, E.M., Garcia-Naveda, L., Salit, J., Blundell, M.L., Friedman, J.M., Breslow, J.L. (2004). Journal of Lipid Research, 45, 1608-1613.
Novel putative SREBP and LXR target genes identified by microarray analysis in liver of cholesterol-fed mice.
Maxwell, K.N., Soccio, R.E., Duncan, E.M., Sehayek, E., Breslow, J.L. (2003). Journal of Lipid Research, 44, 2109-2119.
Loci controlling plasma non-HDL and HDL cholesterol levels in a C57BL /6J x CASA/Rk intercross.
Sehayek, E., Duncan, E.M., Yu, H.J., Petukhova, L., Breslow, J.L. (2003). Journal of Lipid Research, 44, 1744-1750.
Localization of the PE methylation pathway and SR-BI to the canalicular membrane: evidence for apical PC biosynthesis that may promote biliary excretion of phospholipid and cholesterol.
Sehayek, E., Wang, R., Ono, J.G., Zinchuk, V.S., Duncan, E.M., Shefer, S., Vance, D.E., Ananthanarayanan, M., Chait, B.T., Breslow, J.L. (2003). Journal of Lipid Research, 44, 1605-1613.
Necroinflammatory liver disease in BALB/c background, TGF-beta 1-deficient mice requires CD4+ T cells.
Rudner, L.A., Lin, J.T., Park, I.K., Cates, J.M., Dyer, D.A., Franz, D.M., French, M.A., Duncan, E.M., White, H.D., Gorham, J.D. (2003). Journal of Immunology, 170, 4785-4792.
Loci on chromosomes 14 and 2, distinct from ABCG5/ABCG8, regulate plasma plant sterol levels in a C57BL/6J x CASA/Rk intercross.
Sehayek E., Duncan E.M., Lutjohann D., Von Bergmann K., Ono J.G., Batta A.K., Salen G., Breslow J.L. (2002). Proceedings from the National Academy of Sciences, 99, 16215-16219.
Hyodeoxycholic acid efficiently suppresses atherosclerosis formation and plasma cholesterol levels in mice.
Sehayek E., Ono J.G., Duncan E.M., Batta A.K., Salen G., Shefer S., Neguyen L.B., Yang K., Lipkin M., Breslow J.L. (2001). Journal of Lipid Research, 42, 1250-1256.